Ruthenium in PDB 8p6b: Ruthenium Complex Bound to An Antiparallel G-Quadruplex

The structure of Ruthenium Complex Bound to An Antiparallel G-Quadruplex, PDB code: 8p6b was solved by K.T.Mcquaid, C.J.Cardin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	25.23 / 2.50
Space group	P 32 2 1
Cell size a, b, c (Å), α, β, γ (°)	29.131, 29.131, 143.294, 90, 90, 120
R / Rfree (%)	25.9 / 27.3

The structure of Ruthenium Complex Bound to An Antiparallel G-Quadruplex also contains other interesting chemical elements:

Potassium

(K)

2 atoms

The binding sites of Ruthenium atom in the Ruthenium Complex Bound to An Antiparallel G-Quadruplex (pdb code 8p6b). This binding sites where shown within 5.0 Angstroms radius around Ruthenium atom.
In total only one binding site of Ruthenium was determined in the Ruthenium Complex Bound to An Antiparallel G-Quadruplex, PDB code: 8p6b:

Ruthenium binding site 1 out of 1 in the Ruthenium Complex Bound to An Antiparallel G-Quadruplex


Mono view


Stereo pair view

A full contact list of Ruthenium with other atoms in the Ru binding site number 1 of Ruthenium Complex Bound to An Antiparallel G-Quadruplex within 5.0Å range: probe atom residue distance (Å) B Occ A:Ru101 b:103.8 occ:1.00 RU1 A:0K8101 0.0 103.8 1.0 N4 A:0K8101 2.1 85.2 1.0 N3 A:0K8101 2.1 79.7 1.0 N8 A:0K8101 2.1 90.9 1.0 N7 A:0K8101 2.1 88.2 1.0 N6 A:0K8101 2.1 86.7 1.0 N5 A:0K8101 2.1 91.1 1.0 C23 A:0K8101 2.9 82.0 1.0 C22 A:0K8101 2.9 81.5 1.0 C48 A:0K8101 2.9 93.3 1.0 C44 A:0K8101 2.9 93.4 1.0 C39 A:0K8101 3.0 89.1 1.0 C31 A:0K8101 3.0 91.2 1.0 C25 A:0K8101 3.1 87.2 1.0 C51 A:0K8101 3.1 86.7 1.0 C21 A:0K8101 3.1 81.7 1.0 C38 A:0K8101 3.1 86.9 1.0 C40 A:0K8101 3.1 95.5 1.0 C28 A:0K8101 3.1 92.8 1.0 H67 A:0K8101 3.2 106.0 1.0 H77 A:0K8101 3.2 105.8 1.0 H70 A:0K8101 3.2 112.8 1.0 H78 A:0K8101 3.2 116.1 1.0 H66 A:0K8101 3.2 99.5 1.0 H85 A:0K8101 3.2 105.5 1.0 C24 A:0K8101 4.3 80.7 1.0 C18 A:0K8101 4.3 81.3 1.0 C47 A:0K8101 4.3 89.1 1.0 C43 A:0K8101 4.3 94.5 1.0 C35 A:0K8101 4.3 91.1 1.0 C32 A:0K8101 4.4 95.7 1.0 C26 A:0K8101 4.4 86.7 1.0 C20 A:0K8101 4.4 82.5 1.0 C50 A:0K8101 4.4 89.2 1.0 C37 A:0K8101 4.5 87.5 1.0 C41 A:0K8101 4.5 96.5 1.0 C29 A:0K8101 4.5 98.3 1.0 C27 A:0K8101 4.9 83.0 1.0 C49 A:0K8101 4.9 88.8 1.0 C19 A:0K8101 4.9 80.6 1.0 C42 A:0K8101 4.9 92.6 1.0 C36 A:0K8101 4.9 86.9 1.0 C30 A:0K8101 4.9 92.9 1.0 C8 A:DG13 5.0 83.1 1.0

K.T.Mcquaid, C.J.Cardin. Ruthenium Complex Bound to An Antiparallel G-Quadruplex To Be Published.