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Ruthenium in PDB 8h0o: Crystal Structure of Human Serum Albumin and Ruthenium Pza Complex Adduct

Protein crystallography data

The structure of Crystal Structure of Human Serum Albumin and Ruthenium Pza Complex Adduct, PDB code: 8h0o was solved by W.J.Gong, Y.Wang, H.H.Bai, W.M.Wang, H.F.Wang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.94 / 2.48
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 182.441, 38.326, 95.039, 90, 105.1, 90
R / Rfree (%) 24 / 29.4

Other elements in 8h0o:

The structure of Crystal Structure of Human Serum Albumin and Ruthenium Pza Complex Adduct also contains other interesting chemical elements:

Chlorine (Cl) 3 atoms

Ruthenium Binding Sites:

The binding sites of Ruthenium atom in the Crystal Structure of Human Serum Albumin and Ruthenium Pza Complex Adduct (pdb code 8h0o). This binding sites where shown within 5.0 Angstroms radius around Ruthenium atom.
In total 2 binding sites of Ruthenium where determined in the Crystal Structure of Human Serum Albumin and Ruthenium Pza Complex Adduct, PDB code: 8h0o:
Jump to Ruthenium binding site number: 1; 2;

Ruthenium binding site 1 out of 2 in 8h0o

Go back to Ruthenium Binding Sites List in 8h0o
Ruthenium binding site 1 out of 2 in the Crystal Structure of Human Serum Albumin and Ruthenium Pza Complex Adduct


Mono view


Stereo pair view

A full contact list of Ruthenium with other atoms in the Ru binding site number 1 of Crystal Structure of Human Serum Albumin and Ruthenium Pza Complex Adduct within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ru609

b:47.5
occ:0.42
N A:NO606 1.8 68.6 1.0
N3 A:PZA607 2.0 66.2 1.0
N1 A:PZA607 2.0 59.0 1.0
CL A:CL612 2.3 67.5 1.0
CL A:CL613 2.3 78.3 1.0
CL A:CL611 2.3 73.8 1.0
C4 A:PZA607 2.6 63.7 1.0
C A:PZA607 2.7 60.1 1.0
C1 A:PZA607 2.9 64.0 1.0
O A:NO606 2.9 62.6 1.0
C3 A:PZA607 3.8 63.5 1.0
O A:PZA607 3.8 59.8 1.0
C2 A:PZA607 4.0 61.1 1.0
N2 A:PZA607 4.4 59.8 1.0

Ruthenium binding site 2 out of 2 in 8h0o

Go back to Ruthenium Binding Sites List in 8h0o
Ruthenium binding site 2 out of 2 in the Crystal Structure of Human Serum Albumin and Ruthenium Pza Complex Adduct


Mono view


Stereo pair view

A full contact list of Ruthenium with other atoms in the Ru binding site number 2 of Crystal Structure of Human Serum Albumin and Ruthenium Pza Complex Adduct within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ru610

b:71.1
occ:0.54
NH2 A:ARG348 3.0 36.9 1.0
NE A:ARG485 3.2 44.9 1.0
NH1 A:ARG348 3.3 40.5 1.0
NH2 A:ARG485 3.5 40.3 1.0
CG2 A:VAL344 3.5 32.2 1.0
CZ A:ARG348 3.6 42.1 1.0
CZ A:ARG485 3.8 50.0 1.0
CG A:ARG485 4.1 46.0 1.0
CB A:ARG485 4.2 37.8 1.0
CD A:ARG485 4.2 42.7 1.0
OG A:SER342 4.4 37.6 1.0
CD A:PRO486 4.7 44.9 1.0
CE A:MET446 4.8 34.4 1.0
CB A:PRO384 4.8 49.3 1.0
CB A:VAL344 4.8 40.8 1.0
NE A:ARG348 4.9 34.9 1.0

Reference:

W.J.Gong, Y.Wang, H.H.Bai. Crystal Structure of Human Serum Albumin and Ruthenium Pza Complex Adduct To Be Published.
Page generated: Thu Oct 10 13:11:28 2024

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