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Ruthenium in PDB 6fh8: E. Coli Surface Display of Streptavidin For Directed Evolution of An Allylic Deallocase

Protein crystallography data

The structure of E. Coli Surface Display of Streptavidin For Directed Evolution of An Allylic Deallocase, PDB code: 6fh8 was solved by T.Heinisch, F.Schwizer, B.Garabedian, E.Csibra, M.Jeschek, V.Pinheirobernhardes, P.Marliere, S.Panke, T.R.Ward, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.80 / 1.64
Space group I 41 2 2
Cell size a, b, c (Å), α, β, γ (°) 57.722, 57.722, 183.615, 90.00, 90.00, 90.00
R / Rfree (%) 12 / 15.9

Ruthenium Binding Sites:

The binding sites of Ruthenium atom in the E. Coli Surface Display of Streptavidin For Directed Evolution of An Allylic Deallocase (pdb code 6fh8). This binding sites where shown within 5.0 Angstroms radius around Ruthenium atom.
In total only one binding site of Ruthenium was determined in the E. Coli Surface Display of Streptavidin For Directed Evolution of An Allylic Deallocase, PDB code: 6fh8:

Ruthenium binding site 1 out of 1 in 6fh8

Go back to Ruthenium Binding Sites List in 6fh8
Ruthenium binding site 1 out of 1 in the E. Coli Surface Display of Streptavidin For Directed Evolution of An Allylic Deallocase


Mono view


Stereo pair view

A full contact list of Ruthenium with other atoms in the Ru binding site number 1 of E. Coli Surface Display of Streptavidin For Directed Evolution of An Allylic Deallocase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ru201

b:0.0
occ:1.00
RU1 A:JCT201 0.0 0.0 1.0
O5 A:JCT201 1.8 30.0 0.0
C26 A:JCT201 2.0 0.8 0.0
C29 A:JCT201 2.0 92.0 0.0
O5 A:JCT201 2.1 30.0 0.0
C29 A:JCT201 2.1 92.0 0.0
C25 A:JCT201 2.1 94.0 0.0
C26 A:JCT201 2.1 0.8 0.0
C28 A:JCT201 2.1 0.6 0.0
C28 A:JCT201 2.1 0.6 0.0
C27 A:JCT201 2.2 89.3 0.0
C25 A:JCT201 2.2 94.0 0.0
O3 A:JCT201 2.2 0.1 1.0
N5 A:JCT201 2.2 66.4 1.0
C27 A:JCT201 2.2 89.3 0.0
C17 A:JCT201 2.9 60.5 1.0
C24 A:JCT201 2.9 72.2 1.0
C19 A:JCT201 3.2 49.9 1.0
C20 A:JCT201 3.5 41.5 1.0
CE A:MET112 4.2 72.0 1.0
C16 A:JCT201 4.3 37.8 1.0
O4 A:JCT201 4.3 0.6 1.0
C18 A:JCT201 4.5 32.0 1.0
C21 A:JCT201 4.9 30.2 1.0
C15 A:JCT201 5.0 40.6 1.0

Reference:

T.Heinisch, F.Schwizer, B.Garabedian, E.Csibra, M.Jeschek, J.Vallapurackal, V.B.Pinheiro, P.Marliere, S.Panke, T.R.Ward. E. Colisurface Display of Streptavidin For Directed Evolution of An Allylic Deallylase. Chem Sci V. 9 5383 2018.
ISSN: ISSN 2041-6520
PubMed: 30079176
DOI: 10.1039/C8SC00484F
Page generated: Thu Oct 10 13:06:16 2024

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