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Ruthenium in PDB 5wtd: Structure of Human Serum Transferrin Bound Ruthenium at N-Lobe

Protein crystallography data

The structure of Structure of Human Serum Transferrin Bound Ruthenium at N-Lobe, PDB code: 5wtd was solved by H.Sun, M.Wang, T.P.Lai, H.Zhang, Q.Hao, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.19 / 2.50
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 137.113, 157.351, 107.086, 90.00, 90.00, 90.00
R / Rfree (%) 18 / 21.4

Other elements in 5wtd:

The structure of Structure of Human Serum Transferrin Bound Ruthenium at N-Lobe also contains other interesting chemical elements:

Iron (Fe) 1 atom

Ruthenium Binding Sites:

The binding sites of Ruthenium atom in the Structure of Human Serum Transferrin Bound Ruthenium at N-Lobe (pdb code 5wtd). This binding sites where shown within 5.0 Angstroms radius around Ruthenium atom.
In total only one binding site of Ruthenium was determined in the Structure of Human Serum Transferrin Bound Ruthenium at N-Lobe, PDB code: 5wtd:

Ruthenium binding site 1 out of 1 in 5wtd

Go back to Ruthenium Binding Sites List in 5wtd
Ruthenium binding site 1 out of 1 in the Structure of Human Serum Transferrin Bound Ruthenium at N-Lobe


Mono view


Stereo pair view

A full contact list of Ruthenium with other atoms in the Ru binding site number 1 of Structure of Human Serum Transferrin Bound Ruthenium at N-Lobe within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ru703

b:0.7
occ:1.00
O A:HOH916 2.2 95.5 1.0
NE2 A:HIS14 2.3 48.8 1.0
O A:HOH948 2.6 64.6 1.0
NE2 A:HIS289 2.6 97.0 1.0
O A:HOH946 2.7 0.3 1.0
O A:HOH954 2.8 64.8 1.0
CE1 A:HIS14 2.8 46.8 1.0
CE1 A:HIS289 3.2 95.0 1.0
CD2 A:HIS289 3.4 93.4 1.0
CD2 A:HIS14 3.6 36.6 1.0
ND1 A:HIS289 4.1 92.3 1.0
ND1 A:HIS14 4.1 44.2 1.0
CG A:HIS289 4.2 90.5 1.0
O A:HOH931 4.5 44.8 1.0
CG A:HIS14 4.5 33.9 1.0

Reference:

H.Sun, M.Wang, T.P.Lai, H.Zhang, Q.Hao. Ruthenium Bound to the N-Lobe of Human Serum Transferrin To Be Published.
Page generated: Wed Dec 16 02:08:42 2020

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