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Ruthenium in PDB 4rlp: Human P70S6K1 with Ruthenium-Based Inhibitor FL772

Enzymatic activity of Human P70S6K1 with Ruthenium-Based Inhibitor FL772

All present enzymatic activity of Human P70S6K1 with Ruthenium-Based Inhibitor FL772:
2.7.11.1;

Protein crystallography data

The structure of Human P70S6K1 with Ruthenium-Based Inhibitor FL772, PDB code: 4rlp was solved by J.F.Domsic, J.Barber-Rotenberg, J.Salami, J.Qin, R.Marmorstein, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.91 / 2.79
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 62.130, 126.371, 110.571, 90.00, 90.00, 90.00
R / Rfree (%) 20.6 / 23

Other elements in 4rlp:

The structure of Human P70S6K1 with Ruthenium-Based Inhibitor FL772 also contains other interesting chemical elements:

Fluorine (F) 1 atom
Chlorine (Cl) 6 atoms

Ruthenium Binding Sites:

The binding sites of Ruthenium atom in the Human P70S6K1 with Ruthenium-Based Inhibitor FL772 (pdb code 4rlp). This binding sites where shown within 5.0 Angstroms radius around Ruthenium atom.
In total only one binding site of Ruthenium was determined in the Human P70S6K1 with Ruthenium-Based Inhibitor FL772, PDB code: 4rlp:

Ruthenium binding site 1 out of 1 in 4rlp

Go back to Ruthenium Binding Sites List in 4rlp
Ruthenium binding site 1 out of 1 in the Human P70S6K1 with Ruthenium-Based Inhibitor FL772


Mono view


Stereo pair view

A full contact list of Ruthenium with other atoms in the Ru binding site number 1 of Human P70S6K1 with Ruthenium-Based Inhibitor FL772 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ru401

b:92.2
occ:1.00
RU A:72B401 0.0 92.2 1.0
N3 A:72B401 2.0 75.5 1.0
N1 A:72B401 2.1 49.1 1.0
N2 A:72B401 2.1 60.7 1.0
S3 A:72B401 2.3 76.5 1.0
S1 A:72B401 2.3 0.6 1.0
S2 A:72B401 2.3 0.6 1.0
C19 A:72B401 2.9 48.1 1.0
C20 A:72B401 2.9 51.1 1.0
C1 A:72B401 2.9 89.7 1.0
C26 A:72B401 3.2 53.9 1.0
C2 A:72B401 3.3 68.9 1.0
C24 A:72B401 3.3 96.9 1.0
C3 A:72B401 3.3 74.1 1.0
C23 A:72B401 3.3 0.5 1.0
C18 A:72B401 3.4 41.0 1.0
C4 A:72B401 3.4 97.5 1.0
C22 A:72B401 3.5 88.9 1.0
HA3 A:GLY98 3.7 54.3 1.0
C21 A:72B401 3.8 98.5 1.0
C17 A:72B401 4.1 57.1 1.0
C12 A:72B401 4.2 38.5 1.0
HG21 A:VAL105 4.3 57.5 1.0
S4 A:72B401 4.3 0.8 1.0
C7 A:72B401 4.3 40.4 1.0
C27 A:72B401 4.4 48.3 1.0
C13 A:72B401 4.4 39.9 1.0
HB A:VAL105 4.5 60.3 1.0
HG11 A:VAL105 4.6 47.2 1.0
CA A:GLY98 4.7 45.3 1.0
C6 A:72B401 4.9 49.2 1.0
HG21 A:THR235 4.9 86.2 1.0

Reference:

J.Qin, R.Rajaratnam, L.Feng, J.Salami, J.S.Barber-Rotenberg, J.Domsic, P.Reyes-Uribe, H.Liu, W.Dang, S.L.Berger, J.Villanueva, E.Meggers, R.Marmorstein. Development of Organometallic S6K1 Inhibitors. J.Med.Chem. V. 58 305 2015.
ISSN: ISSN 0022-2623
PubMed: 25356520
DOI: 10.1021/JM5011868
Page generated: Wed Dec 16 02:08:22 2020

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