Ruthenium in PDB 4m3v: X-Ray Crystal Structure of the Ruthenium Complex [Ru(Tap)2(Dppz- {ME2})]2+ Bound to D(Tcggtaccga)

The structure of X-Ray Crystal Structure of the Ruthenium Complex [Ru(Tap)2(Dppz- {ME2})]2+ Bound to D(Tcggtaccga), PDB code: 4m3v was solved by H.Niyazi, S.Teixeira, E.Mitchell, T.Forsyth, C.Cardin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	36.93 / 2.05
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	52.220, 52.220, 34.520, 90.00, 90.00, 90.00
R / Rfree (%)	24.5 / 32.1

The structure of X-Ray Crystal Structure of the Ruthenium Complex [Ru(Tap)2(Dppz- {ME2})]2+ Bound to D(Tcggtaccga) also contains other interesting chemical elements:

Barium

(Ba)

1 atom

The binding sites of Ruthenium atom in the X-Ray Crystal Structure of the Ruthenium Complex [Ru(Tap)2(Dppz- {ME2})]2+ Bound to D(Tcggtaccga) (pdb code 4m3v). This binding sites where shown within 5.0 Angstroms radius around Ruthenium atom.
In total 2 binding sites of Ruthenium where determined in the X-Ray Crystal Structure of the Ruthenium Complex [Ru(Tap)2(Dppz- {ME2})]2+ Bound to D(Tcggtaccga), PDB code: 4m3v:
Jump to Ruthenium binding site number: 1; 2;

Ruthenium binding site 1 out of 2 in the X-Ray Crystal Structure of the Ruthenium Complex [Ru(Tap)2(Dppz- {ME2})]2+ Bound to D(Tcggtaccga)


Mono view


Stereo pair view

A full contact list of Ruthenium with other atoms in the Ru binding site number 1 of X-Ray Crystal Structure of the Ruthenium Complex [Ru(Tap)2(Dppz- {ME2})]2+ Bound to D(Tcggtaccga) within 5.0Å range: probe atom residue distance (Å) B Occ A:Ru101 b:39.0 occ:1.00 RU A:RML101 0.0 39.0 1.0 N2 A:RML101 1.8 36.3 1.0 N5 A:RML101 1.8 40.9 1.0 N8 A:RML101 1.8 36.0 1.0 N9 A:RML101 1.9 39.4 1.0 N1 A:RML101 1.9 37.7 1.0 N12 A:RML101 1.9 38.7 1.0 C26 A:RML101 2.6 34.0 1.0 C19 A:RML101 2.7 34.0 1.0 C1 A:RML101 2.7 37.3 1.0 C29 A:RML101 2.7 45.2 1.0 C10 A:RML101 2.7 35.7 1.0 C36 A:RML101 2.8 42.3 1.0 C2 A:RML101 3.0 38.9 1.0 C28 A:RML101 3.0 41.7 1.0 C20 A:RML101 3.0 42.4 1.0 C38 A:RML101 3.0 41.1 1.0 C12 A:RML101 3.1 40.4 1.0 C30 A:RML101 3.1 44.3 1.0 C25 A:RML101 3.9 31.1 1.0 C22 A:RML101 4.0 35.6 1.0 C5 A:RML101 4.1 36.5 1.0 C32 A:RML101 4.1 43.2 1.0 C35 A:RML101 4.1 45.2 1.0 C8 A:RML101 4.2 32.0 1.0 C3 A:RML101 4.2 38.0 1.0 C27 A:RML101 4.2 35.3 1.0 C21 A:RML101 4.3 35.9 1.0 C37 A:RML101 4.3 40.6 1.0 C11 A:RML101 4.3 36.2 1.0 C31 A:RML101 4.3 38.1 1.0 C4 A:RML101 4.7 37.2 1.0 N7 A:RML101 4.7 32.6 1.0 N11 A:RML101 4.7 40.0 1.0 N10 A:RML101 4.7 40.8 1.0 N6 A:RML101 4.8 33.1 1.0 C9 A:RML101 4.8 37.1 1.0 C24 A:RML101 4.9 32.2 1.0 C23 A:RML101 5.0 31.2 1.0

Ruthenium binding site 2 out of 2 in the X-Ray Crystal Structure of the Ruthenium Complex [Ru(Tap)2(Dppz- {ME2})]2+ Bound to D(Tcggtaccga)


Mono view


Stereo pair view

A full contact list of Ruthenium with other atoms in the Ru binding site number 2 of X-Ray Crystal Structure of the Ruthenium Complex [Ru(Tap)2(Dppz- {ME2})]2+ Bound to D(Tcggtaccga) within 5.0Å range: probe atom residue distance (Å) B Occ A:Ru102 b:48.8 occ:0.50 RU A:RML102 0.0 48.8 0.5 N5 A:RML102 1.9 66.0 0.5 N2 A:RML102 1.9 47.2 0.5 N1 A:RML102 1.9 41.8 0.5 N9 A:RML102 2.0 62.5 1.0 N12 A:RML102 2.0 67.3 1.0 N8 A:RML102 2.0 75.5 1.0 C1 A:RML102 2.7 43.6 0.5 C10 A:RML102 2.7 42.0 0.5 C29 A:RML102 2.8 62.6 1.0 C19 A:RML102 2.8 83.3 0.5 C36 A:RML102 2.8 64.1 1.0 C26 A:RML102 2.9 0.5 1.0 C20 A:RML102 3.0 67.5 0.5 C2 A:RML102 3.0 43.9 0.5 C12 A:RML102 3.1 46.9 0.5 C38 A:RML102 3.1 65.1 1.0 C30 A:RML102 3.3 62.2 1.0 C28 A:RML102 3.4 0.5 1.0 C5 A:RML102 4.1 37.9 0.5 C32 A:RML102 4.1 57.3 1.0 C8 A:RML102 4.2 40.8 0.5 C22 A:RML102 4.2 84.0 0.5 C35 A:RML102 4.2 65.0 1.0 C21 A:RML102 4.3 70.2 0.5 C3 A:RML102 4.3 40.6 0.5 C25 A:RML102 4.3 92.8 0.5 C11 A:RML102 4.4 43.9 0.5 C37 A:RML102 4.4 62.7 1.0 C31 A:RML102 4.5 63.1 1.0 C27 A:RML102 4.7 99.3 1.0 C4 A:RML102 4.8 39.5 0.5 N6 A:RML102 4.8 80.0 0.5 N10 A:RML102 4.8 62.9 1.0 N11 A:RML102 4.9 67.9 1.0 C9 A:RML102 4.9 41.0 0.5

H.Niyazi, S.Teixeira, E.Mitchell, T.Forsyth, C.Cardin. X-Ray Crystal Structure of the Ruthenium Complex [Ru(Tap)2(Dppz-{ME2})]2+ Bound to D(Tcggtaccga) To Be Published.