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Ruthenium in PDB 4ltl: Dehydration/Rehydration of A Nucleic Acid System Containing A Polypyridyl Ruthenium Complex at 97% Relative Humidity (7/7)

Protein crystallography data

The structure of Dehydration/Rehydration of A Nucleic Acid System Containing A Polypyridyl Ruthenium Complex at 97% Relative Humidity (7/7), PDB code: 4ltl was solved by J.P.Hall, J.Sanchez-Weatherby, C.J.Cardin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.50 / 2.07
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 43.140, 43.140, 39.310, 90.00, 90.00, 90.00
R / Rfree (%) 15.2 / 19.1

Other elements in 4ltl:

The structure of Dehydration/Rehydration of A Nucleic Acid System Containing A Polypyridyl Ruthenium Complex at 97% Relative Humidity (7/7) also contains other interesting chemical elements:

Barium (Ba) 1 atom

Ruthenium Binding Sites:

The binding sites of Ruthenium atom in the Dehydration/Rehydration of A Nucleic Acid System Containing A Polypyridyl Ruthenium Complex at 97% Relative Humidity (7/7) (pdb code 4ltl). This binding sites where shown within 5.0 Angstroms radius around Ruthenium atom.
In total only one binding site of Ruthenium was determined in the Dehydration/Rehydration of A Nucleic Acid System Containing A Polypyridyl Ruthenium Complex at 97% Relative Humidity (7/7), PDB code: 4ltl:

Ruthenium binding site 1 out of 1 in 4ltl

Go back to Ruthenium Binding Sites List in 4ltl
Ruthenium binding site 1 out of 1 in the Dehydration/Rehydration of A Nucleic Acid System Containing A Polypyridyl Ruthenium Complex at 97% Relative Humidity (7/7)


Mono view


Stereo pair view

A full contact list of Ruthenium with other atoms in the Ru binding site number 1 of Dehydration/Rehydration of A Nucleic Acid System Containing A Polypyridyl Ruthenium Complex at 97% Relative Humidity (7/7) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ru101

b:31.8
occ:1.00
RU A:RKL101 0.0 31.8 1.0
N8 A:RKL101 2.0 29.8 1.0
N9 A:RKL101 2.0 29.1 1.0
N2 A:RKL101 2.0 30.8 1.0
N1 A:RKL101 2.0 32.1 1.0
N5 A:RKL101 2.0 34.0 1.0
N12 A:RKL101 2.1 32.7 1.0
C26 A:RKL101 2.7 30.5 1.0
C1 A:RKL101 2.7 29.4 1.0
C10 A:RKL101 2.7 28.7 1.0
C19 A:RKL101 2.7 30.2 1.0
C29 A:RKL101 2.7 24.8 1.0
C36 A:RKL101 2.8 25.7 1.0
C12 A:RKL101 3.0 33.0 1.0
C28 A:RKL101 3.0 34.6 1.0
C2 A:RKL101 3.0 31.8 1.0
C20 A:RKL101 3.1 36.9 1.0
C30 A:RKL101 3.1 29.1 1.0
C38 A:RKL101 3.2 28.9 1.0
C5 A:RKL101 4.0 30.5 1.0
C8 A:RKL101 4.1 31.2 1.0
C25 A:RKL101 4.1 33.4 1.0
C22 A:RKL101 4.1 33.2 1.0
C32 A:RKL101 4.1 25.0 1.0
C35 A:RKL101 4.1 26.6 1.0
C11 A:RKL101 4.2 31.2 1.0
C27 A:RKL101 4.3 31.2 1.0
C3 A:RKL101 4.3 31.5 1.0
C31 A:RKL101 4.3 26.6 1.0
C21 A:RKL101 4.3 34.1 1.0
C37 A:RKL101 4.4 31.4 1.0
O A:HOH202 4.6 32.6 1.0
N2 A:DG9 4.6 30.4 1.0
C9 A:RKL101 4.7 29.9 1.0
C4 A:RKL101 4.7 31.4 1.0
O A:HOH201 4.7 31.1 1.0
N7 A:RKL101 4.7 30.5 1.0
N6 A:RKL101 4.8 30.4 1.0
N11 A:RKL101 4.8 28.8 1.0
N10 A:RKL101 4.8 24.4 1.0
O A:HOH208 5.0 47.9 1.0

Reference:

J.P.Hall, J.Sanchez-Weatherby, K.O'sullivan, J.M.Kelly, C.J.Cardin. Controlled Dehydration of A Ruthenium-Bound Dna Oligonucleotide Complex Induces Reversible Kinking To Be Published.
Page generated: Wed Dec 16 02:08:19 2020

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