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Ruthenium in PDB 4ltk: Dehydration/Rehydration of A Nucleic Acid System Containing A Polypyridyl Ruthenium Complex at 74% Relative Humidity (6/7)

Protein crystallography data

The structure of Dehydration/Rehydration of A Nucleic Acid System Containing A Polypyridyl Ruthenium Complex at 74% Relative Humidity (6/7), PDB code: 4ltk was solved by J.P.Hall, J.Sanchez-Weatherby, C.J.Cardin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 23.35 / 1.45
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 44.150, 44.150, 27.490, 90.00, 90.00, 90.00
R / Rfree (%) 13.6 / 15.4

Other elements in 4ltk:

The structure of Dehydration/Rehydration of A Nucleic Acid System Containing A Polypyridyl Ruthenium Complex at 74% Relative Humidity (6/7) also contains other interesting chemical elements:

Barium (Ba) 1 atom
Chlorine (Cl) 1 atom

Ruthenium Binding Sites:

The binding sites of Ruthenium atom in the Dehydration/Rehydration of A Nucleic Acid System Containing A Polypyridyl Ruthenium Complex at 74% Relative Humidity (6/7) (pdb code 4ltk). This binding sites where shown within 5.0 Angstroms radius around Ruthenium atom.
In total only one binding site of Ruthenium was determined in the Dehydration/Rehydration of A Nucleic Acid System Containing A Polypyridyl Ruthenium Complex at 74% Relative Humidity (6/7), PDB code: 4ltk:

Ruthenium binding site 1 out of 1 in 4ltk

Go back to Ruthenium Binding Sites List in 4ltk
Ruthenium binding site 1 out of 1 in the Dehydration/Rehydration of A Nucleic Acid System Containing A Polypyridyl Ruthenium Complex at 74% Relative Humidity (6/7)


Mono view


Stereo pair view

A full contact list of Ruthenium with other atoms in the Ru binding site number 1 of Dehydration/Rehydration of A Nucleic Acid System Containing A Polypyridyl Ruthenium Complex at 74% Relative Humidity (6/7) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ru101

b:15.0
occ:1.00
RU A:RKL101 0.0 15.0 1.0
N1 A:RKL101 2.0 16.4 1.0
N9 A:RKL101 2.0 15.4 1.0
N5 A:RKL101 2.0 15.1 1.0
N8 A:RKL101 2.0 14.4 1.0
N2 A:RKL101 2.1 15.4 1.0
N12 A:RKL101 2.1 15.1 1.0
C26 A:RKL101 2.8 15.2 1.0
C29 A:RKL101 2.8 16.1 1.0
C10 A:RKL101 2.8 14.8 1.0
C36 A:RKL101 2.8 15.1 1.0
C1 A:RKL101 2.8 15.0 1.0
C19 A:RKL101 2.8 12.8 1.0
C2 A:RKL101 3.0 14.6 1.0
C38 A:RKL101 3.1 16.3 1.0
C12 A:RKL101 3.1 15.2 1.0
C30 A:RKL101 3.1 17.0 1.0
C20 A:RKL101 3.1 15.8 1.0
C28 A:RKL101 3.2 17.6 1.0
C25 A:RKL101 4.2 15.1 1.0
C35 A:RKL101 4.2 15.6 1.0
C5 A:RKL101 4.2 16.0 1.0
C32 A:RKL101 4.2 15.8 1.0
C8 A:RKL101 4.2 14.8 1.0
C22 A:RKL101 4.3 13.6 1.0
C3 A:RKL101 4.3 17.7 1.0
C37 A:RKL101 4.3 16.5 1.0
C31 A:RKL101 4.4 18.5 1.0
C11 A:RKL101 4.4 15.5 1.0
C21 A:RKL101 4.4 15.2 1.0
C27 A:RKL101 4.4 16.1 1.0
O A:HOH201 4.7 17.0 1.0
C4 A:RKL101 4.8 16.8 1.0
N11 A:RKL101 4.8 16.8 1.0
N10 A:RKL101 4.8 18.4 1.0
C9 A:RKL101 4.8 15.9 1.0
N7 A:RKL101 4.8 15.5 1.0
N6 A:RKL101 4.9 15.4 1.0

Reference:

J.P.Hall, J.Sanchez-Weatherby, K.O'sullivan, J.M.Kelly, C.J.Cardin. Controlled Dehydration of A Ruthenium-Bound Dna Oligonucleotide Complex Induces Reversible Kinking To Be Published.
Page generated: Thu Oct 10 12:54:02 2024

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