Atomistry » Ruthenium » PDB 4l55-5ira » 4lth
Atomistry »
  Ruthenium »
    PDB 4l55-5ira »
      4lth »

Ruthenium in PDB 4lth: Dehydration/Rehydration of A Nucleic Acid System Containing A Polypyridyl Ruthenium Complex at 97% Relative Humidity (3/7)

Protein crystallography data

The structure of Dehydration/Rehydration of A Nucleic Acid System Containing A Polypyridyl Ruthenium Complex at 97% Relative Humidity (3/7), PDB code: 4lth was solved by J.P.Hall, J.Sanchez-Weatherby, C.J.Cardin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.39 / 1.60
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 42.980, 42.980, 39.420, 90.00, 90.00, 90.00
R / Rfree (%) 14.5 / 17.4

Other elements in 4lth:

The structure of Dehydration/Rehydration of A Nucleic Acid System Containing A Polypyridyl Ruthenium Complex at 97% Relative Humidity (3/7) also contains other interesting chemical elements:

Barium (Ba) 1 atom

Ruthenium Binding Sites:

The binding sites of Ruthenium atom in the Dehydration/Rehydration of A Nucleic Acid System Containing A Polypyridyl Ruthenium Complex at 97% Relative Humidity (3/7) (pdb code 4lth). This binding sites where shown within 5.0 Angstroms radius around Ruthenium atom.
In total only one binding site of Ruthenium was determined in the Dehydration/Rehydration of A Nucleic Acid System Containing A Polypyridyl Ruthenium Complex at 97% Relative Humidity (3/7), PDB code: 4lth:

Ruthenium binding site 1 out of 1 in 4lth

Go back to Ruthenium Binding Sites List in 4lth
Ruthenium binding site 1 out of 1 in the Dehydration/Rehydration of A Nucleic Acid System Containing A Polypyridyl Ruthenium Complex at 97% Relative Humidity (3/7)


Mono view


Stereo pair view

A full contact list of Ruthenium with other atoms in the Ru binding site number 1 of Dehydration/Rehydration of A Nucleic Acid System Containing A Polypyridyl Ruthenium Complex at 97% Relative Humidity (3/7) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ru101

b:24.0
occ:1.00
RU A:RKL101 0.0 24.0 1.0
N8 A:RKL101 2.0 24.1 1.0
N9 A:RKL101 2.0 21.7 1.0
N5 A:RKL101 2.0 25.0 1.0
N2 A:RKL101 2.1 25.1 1.0
N1 A:RKL101 2.1 24.1 1.0
N12 A:RKL101 2.1 22.8 1.0
C26 A:RKL101 2.8 23.3 1.0
C19 A:RKL101 2.8 24.4 1.0
C29 A:RKL101 2.8 21.7 1.0
C10 A:RKL101 2.8 23.6 1.0
C36 A:RKL101 2.8 21.6 1.0
C1 A:RKL101 2.8 23.8 1.0
C12 A:RKL101 3.1 24.0 1.0
C28 A:RKL101 3.1 22.7 1.0
C2 A:RKL101 3.1 25.8 1.0
C20 A:RKL101 3.1 29.6 1.0
C30 A:RKL101 3.1 23.5 1.0
C38 A:RKL101 3.2 24.4 1.0
C25 A:RKL101 4.2 27.0 1.0
C32 A:RKL101 4.2 22.1 1.0
C22 A:RKL101 4.2 26.0 1.0
C5 A:RKL101 4.2 23.6 1.0
C8 A:RKL101 4.2 24.1 1.0
C35 A:RKL101 4.2 20.0 1.0
C11 A:RKL101 4.3 24.6 1.0
C3 A:RKL101 4.4 28.0 1.0
C21 A:RKL101 4.4 27.6 1.0
C31 A:RKL101 4.4 22.1 1.0
C27 A:RKL101 4.4 23.6 1.0
C37 A:RKL101 4.5 24.3 1.0
O A:HOH202 4.6 26.2 1.0
N2 A:DG9 4.6 24.2 1.0
O A:HOH205 4.6 25.5 1.0
C9 A:RKL101 4.8 24.9 1.0
N7 A:RKL101 4.8 25.4 1.0
C4 A:RKL101 4.8 24.9 1.0
N6 A:RKL101 4.8 25.9 1.0
N10 A:RKL101 4.8 21.1 1.0
N11 A:RKL101 4.9 22.3 1.0

Reference:

J.P.Hall, J.Sanchez-Weatherby, K.O'sullivan, J.M.Kelly, C.J.Cardin. Controlled Dehydration of A Ruthenium-Bound Dna Oligonucleotide Complex Induces Reversible Kinking To Be Published.
Page generated: Thu Oct 10 12:54:02 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy