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Ruthenium in PDB 4lth: Dehydration/Rehydration of A Nucleic Acid System Containing A Polypyridyl Ruthenium Complex at 97% Relative Humidity (3/7)

Protein crystallography data

The structure of Dehydration/Rehydration of A Nucleic Acid System Containing A Polypyridyl Ruthenium Complex at 97% Relative Humidity (3/7), PDB code: 4lth was solved by J.P.Hall, J.Sanchez-Weatherby, C.J.Cardin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.39 / 1.60
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 42.980, 42.980, 39.420, 90.00, 90.00, 90.00
R / Rfree (%) 14.5 / 17.4

Other elements in 4lth:

The structure of Dehydration/Rehydration of A Nucleic Acid System Containing A Polypyridyl Ruthenium Complex at 97% Relative Humidity (3/7) also contains other interesting chemical elements:

Barium (Ba) 1 atom

Ruthenium Binding Sites:

The binding sites of Ruthenium atom in the Dehydration/Rehydration of A Nucleic Acid System Containing A Polypyridyl Ruthenium Complex at 97% Relative Humidity (3/7) (pdb code 4lth). This binding sites where shown within 5.0 Angstroms radius around Ruthenium atom.
In total only one binding site of Ruthenium was determined in the Dehydration/Rehydration of A Nucleic Acid System Containing A Polypyridyl Ruthenium Complex at 97% Relative Humidity (3/7), PDB code: 4lth:

Ruthenium binding site 1 out of 1 in 4lth

Go back to Ruthenium Binding Sites List in 4lth
Ruthenium binding site 1 out of 1 in the Dehydration/Rehydration of A Nucleic Acid System Containing A Polypyridyl Ruthenium Complex at 97% Relative Humidity (3/7)


Mono view


Stereo pair view

A full contact list of Ruthenium with other atoms in the Ru binding site number 1 of Dehydration/Rehydration of A Nucleic Acid System Containing A Polypyridyl Ruthenium Complex at 97% Relative Humidity (3/7) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ru101

b:24.0
occ:1.00
RU A:RKL101 0.0 24.0 1.0
N8 A:RKL101 2.0 24.1 1.0
N9 A:RKL101 2.0 21.7 1.0
N5 A:RKL101 2.0 25.0 1.0
N2 A:RKL101 2.1 25.1 1.0
N1 A:RKL101 2.1 24.1 1.0
N12 A:RKL101 2.1 22.8 1.0
C26 A:RKL101 2.8 23.3 1.0
C19 A:RKL101 2.8 24.4 1.0
C29 A:RKL101 2.8 21.7 1.0
C10 A:RKL101 2.8 23.6 1.0
C36 A:RKL101 2.8 21.6 1.0
C1 A:RKL101 2.8 23.8 1.0
C12 A:RKL101 3.1 24.0 1.0
C28 A:RKL101 3.1 22.7 1.0
C2 A:RKL101 3.1 25.8 1.0
C20 A:RKL101 3.1 29.6 1.0
C30 A:RKL101 3.1 23.5 1.0
C38 A:RKL101 3.2 24.4 1.0
C25 A:RKL101 4.2 27.0 1.0
C32 A:RKL101 4.2 22.1 1.0
C22 A:RKL101 4.2 26.0 1.0
C5 A:RKL101 4.2 23.6 1.0
C8 A:RKL101 4.2 24.1 1.0
C35 A:RKL101 4.2 20.0 1.0
C11 A:RKL101 4.3 24.6 1.0
C3 A:RKL101 4.4 28.0 1.0
C21 A:RKL101 4.4 27.6 1.0
C31 A:RKL101 4.4 22.1 1.0
C27 A:RKL101 4.4 23.6 1.0
C37 A:RKL101 4.5 24.3 1.0
O A:HOH202 4.6 26.2 1.0
N2 A:DG9 4.6 24.2 1.0
O A:HOH205 4.6 25.5 1.0
C9 A:RKL101 4.8 24.9 1.0
N7 A:RKL101 4.8 25.4 1.0
C4 A:RKL101 4.8 24.9 1.0
N6 A:RKL101 4.8 25.9 1.0
N10 A:RKL101 4.8 21.1 1.0
N11 A:RKL101 4.9 22.3 1.0

Reference:

J.P.Hall, J.Sanchez-Weatherby, K.O'sullivan, J.M.Kelly, C.J.Cardin. Controlled Dehydration of A Ruthenium-Bound Dna Oligonucleotide Complex Induces Reversible Kinking To Be Published.
Page generated: Wed Dec 16 02:08:19 2020

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