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Ruthenium in PDB 4ltg: Dehydration/Rehydration of A Nucleic Acid System Containing A Polypyridyl Ruthenium Complex at 74% Relative Humidity (2/7)

Protein crystallography data

The structure of Dehydration/Rehydration of A Nucleic Acid System Containing A Polypyridyl Ruthenium Complex at 74% Relative Humidity (2/7), PDB code: 4ltg was solved by J.P.Hall, J.Sanchez-Weatherby, C.J.Cardin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 31.32 / 1.18
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 44.300, 44.300, 27.550, 90.00, 90.00, 90.00
R / Rfree (%) 8.9 / 11.3

Other elements in 4ltg:

The structure of Dehydration/Rehydration of A Nucleic Acid System Containing A Polypyridyl Ruthenium Complex at 74% Relative Humidity (2/7) also contains other interesting chemical elements:

Barium (Ba) 1 atom
Chlorine (Cl) 1 atom

Ruthenium Binding Sites:

The binding sites of Ruthenium atom in the Dehydration/Rehydration of A Nucleic Acid System Containing A Polypyridyl Ruthenium Complex at 74% Relative Humidity (2/7) (pdb code 4ltg). This binding sites where shown within 5.0 Angstroms radius around Ruthenium atom.
In total only one binding site of Ruthenium was determined in the Dehydration/Rehydration of A Nucleic Acid System Containing A Polypyridyl Ruthenium Complex at 74% Relative Humidity (2/7), PDB code: 4ltg:

Ruthenium binding site 1 out of 1 in 4ltg

Go back to Ruthenium Binding Sites List in 4ltg
Ruthenium binding site 1 out of 1 in the Dehydration/Rehydration of A Nucleic Acid System Containing A Polypyridyl Ruthenium Complex at 74% Relative Humidity (2/7)


Mono view


Stereo pair view

A full contact list of Ruthenium with other atoms in the Ru binding site number 1 of Dehydration/Rehydration of A Nucleic Acid System Containing A Polypyridyl Ruthenium Complex at 74% Relative Humidity (2/7) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ru101

b:11.7
occ:1.00
RU A:RKL101 0.0 11.7 1.0
N9 A:RKL101 2.0 12.1 1.0
N5 A:RKL101 2.1 11.8 1.0
N12 A:RKL101 2.1 11.4 1.0
N2 A:RKL101 2.1 12.6 1.0
N1 A:RKL101 2.1 12.7 1.0
N8 A:RKL101 2.1 11.9 1.0
C26 A:RKL101 2.9 11.1 1.0
C10 A:RKL101 2.9 12.1 1.0
C1 A:RKL101 2.9 12.7 1.0
C19 A:RKL101 2.9 10.7 1.0
C36 A:RKL101 2.9 12.3 1.0
C29 A:RKL101 2.9 12.4 1.0
C12 A:RKL101 3.1 13.3 1.0
C38 A:RKL101 3.1 12.2 1.0
C30 A:RKL101 3.1 13.7 1.0
C2 A:RKL101 3.1 13.8 1.0
C20 A:RKL101 3.1 11.9 1.0
C28 A:RKL101 3.2 13.0 1.0
H12 A:RKL101 3.2 13.7 1.0
H38 A:RKL101 3.3 12.4 1.0
H30 A:RKL101 3.3 14.5 1.0
H20 A:RKL101 3.3 12.0 1.0
H2 A:RKL101 3.3 13.9 1.0
H28 A:RKL101 3.4 13.4 1.0
C5 A:RKL101 4.2 13.2 1.0
C35 A:RKL101 4.2 13.0 1.0
C25 A:RKL101 4.2 11.5 1.0
C22 A:RKL101 4.3 11.3 1.0
C8 A:RKL101 4.3 13.0 1.0
C32 A:RKL101 4.3 12.9 1.0
C3 A:RKL101 4.4 15.2 1.0
C37 A:RKL101 4.4 13.5 1.0
C31 A:RKL101 4.4 14.0 1.0
C11 A:RKL101 4.4 15.5 1.0
C21 A:RKL101 4.4 12.5 1.0
C27 A:RKL101 4.4 13.5 1.0
O A:HOH219 4.5 17.1 1.0
H21 A:DG4 4.6 11.7 1.0
O A:HOH202 4.7 15.6 1.0
C4 A:RKL101 4.8 14.1 1.0
N11 A:RKL101 4.8 14.2 1.0
N10 A:RKL101 4.9 15.5 1.0
C9 A:RKL101 4.9 15.3 1.0
N6 A:RKL101 4.9 12.2 1.0
N7 A:RKL101 4.9 13.0 1.0

Reference:

J.P.Hall, J.Sanchez-Weatherby, K.O'sullivan, J.M.Kelly, C.J.Cardin. Controlled Dehydration of A Ruthenium-Bound Dna Oligonucleotide Complex Induces Reversible Kinking To Be Published.
Page generated: Thu Oct 10 12:54:03 2024

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