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Ruthenium in PDB 4ltf: Dehydration/Rehydration of A Nucleic Acid System Containing A Polypyridyl Ruthenium Complex at 97% Relative Humidity(1/7)

Protein crystallography data

The structure of Dehydration/Rehydration of A Nucleic Acid System Containing A Polypyridyl Ruthenium Complex at 97% Relative Humidity(1/7), PDB code: 4ltf was solved by J.P.Hall, J.Sanchez-Weatherby, C.J.Cardin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.09 / 1.50
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 42.980, 42.980, 39.510, 90.00, 90.00, 90.00
R / Rfree (%) 13.7 / 15.8

Other elements in 4ltf:

The structure of Dehydration/Rehydration of A Nucleic Acid System Containing A Polypyridyl Ruthenium Complex at 97% Relative Humidity(1/7) also contains other interesting chemical elements:

Barium (Ba) 1 atom

Ruthenium Binding Sites:

The binding sites of Ruthenium atom in the Dehydration/Rehydration of A Nucleic Acid System Containing A Polypyridyl Ruthenium Complex at 97% Relative Humidity(1/7) (pdb code 4ltf). This binding sites where shown within 5.0 Angstroms radius around Ruthenium atom.
In total only one binding site of Ruthenium was determined in the Dehydration/Rehydration of A Nucleic Acid System Containing A Polypyridyl Ruthenium Complex at 97% Relative Humidity(1/7), PDB code: 4ltf:

Ruthenium binding site 1 out of 1 in 4ltf

Go back to Ruthenium Binding Sites List in 4ltf
Ruthenium binding site 1 out of 1 in the Dehydration/Rehydration of A Nucleic Acid System Containing A Polypyridyl Ruthenium Complex at 97% Relative Humidity(1/7)


Mono view


Stereo pair view

A full contact list of Ruthenium with other atoms in the Ru binding site number 1 of Dehydration/Rehydration of A Nucleic Acid System Containing A Polypyridyl Ruthenium Complex at 97% Relative Humidity(1/7) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ru101

b:23.2
occ:1.00
RU A:RKL101 0.0 23.2 1.0
N8 A:RKL101 2.0 24.6 1.0
N9 A:RKL101 2.0 21.8 1.0
N5 A:RKL101 2.1 24.7 1.0
N2 A:RKL101 2.1 23.5 1.0
N1 A:RKL101 2.1 22.2 1.0
N12 A:RKL101 2.1 22.5 1.0
C26 A:RKL101 2.8 22.9 1.0
C29 A:RKL101 2.8 22.5 1.0
C19 A:RKL101 2.8 24.0 1.0
C36 A:RKL101 2.8 21.2 1.0
C10 A:RKL101 2.8 22.6 1.0
C1 A:RKL101 2.8 23.2 1.0
C12 A:RKL101 3.1 23.1 1.0
C2 A:RKL101 3.1 23.1 1.0
C28 A:RKL101 3.1 23.4 1.0
C20 A:RKL101 3.1 27.4 1.0
C30 A:RKL101 3.1 22.8 1.0
C38 A:RKL101 3.2 22.8 1.0
C25 A:RKL101 4.2 24.9 1.0
C32 A:RKL101 4.2 21.1 1.0
C22 A:RKL101 4.2 23.8 1.0
C8 A:RKL101 4.2 23.1 1.0
C35 A:RKL101 4.2 20.9 1.0
C5 A:RKL101 4.2 22.8 1.0
C11 A:RKL101 4.3 23.4 1.0
C3 A:RKL101 4.3 24.8 1.0
C31 A:RKL101 4.4 22.6 1.0
C27 A:RKL101 4.4 24.9 1.0
C21 A:RKL101 4.4 25.5 1.0
C37 A:RKL101 4.5 22.6 1.0
O A:HOH214 4.6 28.0 1.0
O A:HOH213 4.6 26.4 1.0
N2 A:DG9 4.6 24.2 1.0
C9 A:RKL101 4.8 23.3 1.0
C4 A:RKL101 4.8 23.4 1.0
N7 A:RKL101 4.8 24.4 1.0
N6 A:RKL101 4.8 25.1 1.0
N10 A:RKL101 4.8 21.8 1.0
N11 A:RKL101 4.9 21.9 1.0

Reference:

J.P.Hall, J.Sanchez-Weatherby, K.O'sullivan, J.M.Kelly, C.J.Cardin. Controlled Dehydration of A Ruthenium-Bound Dna Oligonucleotide Complex Induces Reversible Kinking To Be Published.
Page generated: Thu Oct 10 12:54:02 2024

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