Atomistry » Ruthenium » PDB 1bex-3fy0 » 2oi4
Atomistry »
  Ruthenium »
    PDB 1bex-3fy0 »
      2oi4 »

Ruthenium in PDB 2oi4: Crystal Structure of Human PIM1 in Complex with Fluorinated Ruthenium Pyridocarbazole

Enzymatic activity of Crystal Structure of Human PIM1 in Complex with Fluorinated Ruthenium Pyridocarbazole

All present enzymatic activity of Crystal Structure of Human PIM1 in Complex with Fluorinated Ruthenium Pyridocarbazole:
2.7.11.1;

Protein crystallography data

The structure of Crystal Structure of Human PIM1 in Complex with Fluorinated Ruthenium Pyridocarbazole, PDB code: 2oi4 was solved by J.Maksimoska, E.Meggers, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 18.54 / 2.20
Space group P 65
Cell size a, b, c (Å), α, β, γ (°) 98.104, 98.104, 80.672, 90.00, 90.00, 120.00
R / Rfree (%) 18.9 / 24.4

Other elements in 2oi4:

The structure of Crystal Structure of Human PIM1 in Complex with Fluorinated Ruthenium Pyridocarbazole also contains other interesting chemical elements:

Fluorine (F) 1 atom
Chlorine (Cl) 1 atom

Ruthenium Binding Sites:

The binding sites of Ruthenium atom in the Crystal Structure of Human PIM1 in Complex with Fluorinated Ruthenium Pyridocarbazole (pdb code 2oi4). This binding sites where shown within 5.0 Angstroms radius around Ruthenium atom.
In total only one binding site of Ruthenium was determined in the Crystal Structure of Human PIM1 in Complex with Fluorinated Ruthenium Pyridocarbazole, PDB code: 2oi4:

Ruthenium binding site 1 out of 1 in 2oi4

Go back to Ruthenium Binding Sites List in 2oi4
Ruthenium binding site 1 out of 1 in the Crystal Structure of Human PIM1 in Complex with Fluorinated Ruthenium Pyridocarbazole


Mono view


Stereo pair view

A full contact list of Ruthenium with other atoms in the Ru binding site number 1 of Crystal Structure of Human PIM1 in Complex with Fluorinated Ruthenium Pyridocarbazole within 5.0Å range:
probe atom residue distance (Å) B Occ
X:Ru1000

b:25.8
occ:1.00
RU12 X:JM11000 0.0 25.8 1.0
C11 X:JM11000 2.0 25.6 1.0
N18 X:JM11000 2.0 22.9 1.0
N22 X:JM11000 2.1 22.0 1.0
C13 X:JM11000 2.1 28.1 1.0
C14 X:JM11000 2.1 28.0 1.0
C15 X:JM11000 2.2 25.5 1.0
C16 X:JM11000 2.2 26.8 1.0
C17 X:JM11000 2.2 26.0 1.0
C31 X:JM11000 2.9 23.0 1.0
C12 X:JM11000 2.9 24.8 1.0
O10 X:JM11000 3.1 31.0 1.0
C19 X:JM11000 3.1 22.7 1.0
C23 X:JM11000 3.3 22.5 1.0
C28 X:JM11000 4.0 22.2 1.0
C30 X:JM11000 4.2 21.9 1.0
C29 X:JM11000 4.3 21.2 1.0
C20 X:JM11000 4.3 23.4 1.0
CD1 X:ILE185 4.3 17.1 1.0
C24 X:JM11000 4.4 21.8 1.0
CZ X:PHE49 4.6 25.0 1.0
CE2 X:PHE49 4.8 23.4 1.0
C21 X:JM11000 4.9 22.4 1.0
CG2 X:VAL52 4.9 21.9 1.0

Reference:

N.Pagano, J.Maksimoska, H.Bregman, D.S.Williams, R.D.Webster, F.Xue, E.Meggers. Ruthenium Half-Sandwich Complexes As Protein Kinase Inhibitors: Derivatization of the Pyridocarbazole Pharmacophore Ligand. Org.Biomol.Chem. V. 5 1218 2007.
ISSN: ISSN 1477-0520
PubMed: 17406720
DOI: 10.1039/B700433H
Page generated: Thu Oct 10 12:46:29 2024

Last articles

Zn in 7WT5
Zn in 7WTU
Zn in 7WTV
Zn in 7WTT
Zn in 7WT4
Zn in 7WT3
Zn in 7WSS
Zn in 7WT2
Zn in 7WT0
Zn in 7WT1
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy