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Ruthenium in PDB 2hto: Ruthenium Hexammine Ion Interactions with Z-Dna

Protein crystallography data

The structure of Ruthenium Hexammine Ion Interactions with Z-Dna, PDB code: 2hto was solved by D.Bharanidharan, S.Thiyagarajan, N.Gautham, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 25.35 / 1.54
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 17.953, 30.821, 44.596, 90.00, 90.00, 90.00
R / Rfree (%) 18.9 / 21.7

Ruthenium Binding Sites:

The binding sites of Ruthenium atom in the Ruthenium Hexammine Ion Interactions with Z-Dna (pdb code 2hto). This binding sites where shown within 5.0 Angstroms radius around Ruthenium atom.
In total only one binding site of Ruthenium was determined in the Ruthenium Hexammine Ion Interactions with Z-Dna, PDB code: 2hto:

Ruthenium binding site 1 out of 1 in 2hto

Go back to Ruthenium Binding Sites List in 2hto
Ruthenium binding site 1 out of 1 in the Ruthenium Hexammine Ion Interactions with Z-Dna


Mono view


Stereo pair view

A full contact list of Ruthenium with other atoms in the Ru binding site number 1 of Ruthenium Hexammine Ion Interactions with Z-Dna within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ru13

b:30.2
occ:0.70
RU A:NRU13 0.0 30.2 0.7
N1 A:NRU13 2.1 28.5 0.7
N6 A:NRU13 2.1 32.1 0.7
N5 A:NRU13 2.1 29.2 0.7
N2 A:NRU13 2.1 29.0 0.7
N4 A:NRU13 2.1 30.8 0.7
N3 A:NRU13 2.1 27.4 0.7
N7 A:DA6 3.9 16.0 1.0
N6 A:DA6 4.0 13.4 1.0
O A:HOH21 4.0 38.6 1.0
OP1 A:DC5 4.3 13.4 0.4
C5 A:DA6 4.7 15.9 1.0
O4 B:DT7 4.7 15.3 1.0
C6 A:DA6 4.8 14.1 1.0

Reference:

D.Bharanidharan, S.Thiyagarajan, N.Gautham. Hexammineruthenium(III) Ion Interactions with Z-Dna Acta Crystallogr.,Sect.F V. 63 1008 2007.
ISSN: ESSN 1744-3091
PubMed: 18084080
DOI: 10.1107/S1744309107047781
Page generated: Wed Dec 16 02:07:56 2020

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